Gene MCA1119 details

Gene Information

• Locus tag: MCA1119
• Symbol: xpsJ
• ID: 3104727
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1173976
• End bp: 1174578
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637170304
• Product: general secretory pathway protein J
• Protein accession: YP_113589
• Protein GI: 53804518
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4795] Type II secretory pathway, component PulJ
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTCCC GTGGTTTTAC CCTGATCGAG GTGCTGATCG CGACCAGCCT GCTGGCGGTA 
ATGTCGCTGA TCCTCACTGC AAGTCTGCGC ATGGCGGCCG CTTCATGGGA AAAGGGCGAG 
GTGTCGGTGG AGCGCGCCAG CCGCGCCCTG GTGGTGCAGG AGTTTCTTCG CGCCCGGTTG 
GCGACGGCTT TGCCGATCCG TGAGCCCGGC GAGATGAACC GGATGGTCCT GGCGTTTCGC 
GGCACTTCGC AGACCCTGAG TTTCGTGTCC ACCCTGCCGG CTTACGTGCG GGGCGGTCTC 
CACCGGTTCC GGCTGTATCT GGCGCAGCGG GAAGACGGGA CGGACCTGCG GGTTGCCGTC 
CTGCCCTTGA CCAACAATCC CCAGGATCCG GTCGCTCCCA TCGACGACGT GCTCGTCCTG 
GAAGGAGTGA CGCAGTTCCG TTTGTCCTAT CTGGGGCAGA ACGAACGCAA CGGTGAACTG 
GTCTGGGTCG AGGAATGGAA TGAGCCGGTC ATGCCGCGGA TGGTCCGCTT CGTGATCCAG 
CCGGAAGGCG AGGACCCGTG GCCGCCGTTG CTGGTCGCGC CCCGCCTCGA GGTGGCGCGG 
TGA 

 

Protein sequence

MASRGFTLIE VLIATSLLAV MSLILTASLR MAAASWEKGE VSVERASRAL VVQEFLRARL 
ATALPIREPG EMNRMVLAFR GTSQTLSFVS TLPAYVRGGL HRFRLYLAQR EDGTDLRVAV 
LPLTNNPQDP VAPIDDVLVL EGVTQFRLSY LGQNERNGEL VWVEEWNEPV MPRMVRFVIQ 
PEGEDPWPPL LVAPRLEVAR