5 homologs were found in PanDaTox collection
for query gene RPC_0714 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_0714  hypothetical protein  100 
 
 
222 aa  424  1e-118  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.4972  normal  0.328447 
 
 
-
 
NC_009485  BBta_0959  hypothetical protein  45.14 
 
 
217 aa  124  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.385717  normal  0.798669 
 
 
-
 
NC_007778  RPB_0867  hypothetical protein  44.44 
 
 
178 aa  111  7.000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0977  hypothetical protein  44 
 
 
212 aa  94.4  1e-18  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00655382  normal 
 
 
-
 
NC_011004  Rpal_5188  putative exported protein of unknown function  57.14 
 
 
223 aa  92.8  3e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.705252  n/a   
 
 
-
 
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