7 homologs were found in PanDaTox collection
for query gene Rpal_5188 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_5188  putative exported protein of unknown function  100 
 
 
223 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.705252  n/a   
 
 
-
 
NC_007778  RPB_0867  hypothetical protein  50.91 
 
 
178 aa  130  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0977  hypothetical protein  54.76 
 
 
212 aa  124  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00655382  normal 
 
 
-
 
NC_009485  BBta_0959  hypothetical protein  41.92 
 
 
217 aa  105  4e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.385717  normal  0.798669 
 
 
-
 
NC_007925  RPC_0714  hypothetical protein  57.14 
 
 
222 aa  99.4  4e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.4972  normal  0.328447 
 
 
-
 
NC_009043  PICST_82710  Inositol-1,4,5-triphosphate 5-phosphatase  28.57 
 
 
1118 aa  49.3  0.00004  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.0595728  normal  0.124532 
 
 
-
 
NC_013721  HMPREF0424_0610  pullulanase, type I  26.42 
 
 
1888 aa  47  0.0002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
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