10 homologs were found in PanDaTox collection
for query gene Psyc_0779 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_0779  hypothetical protein  100 
 
 
129 aa  265  2e-70  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0785  hypothetical protein  94.57 
 
 
129 aa  251  2.0000000000000002e-66  Psychrobacter cryohalolentis K5  Bacteria  normal  0.251796  normal 
 
 
-
 
NC_009524  PsycPRwf_1743  hypothetical protein  56.69 
 
 
129 aa  148  2e-35  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.0765489 
 
 
-
 
NC_002947  PP_3924  sterol-binding domain protein  32.97 
 
 
105 aa  43.5  0.001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0884325 
 
 
-
 
NC_009512  Pput_1911  sterol-binding domain-containing protein  32.97 
 
 
105 aa  43.5  0.001  Pseudomonas putida F1  Bacteria  normal  0.272988  normal 
 
 
-
 
NC_010322  PputGB1_3558  sterol-binding domain-containing protein  42.37 
 
 
105 aa  43.5  0.001  Pseudomonas putida GB-1  Bacteria  normal  0.336208  normal  0.355565 
 
 
-
 
NC_010501  PputW619_3213  sterol-binding domain-containing protein  42.37 
 
 
105 aa  43.5  0.001  Pseudomonas putida W619  Bacteria  normal  normal  0.533818 
 
 
-
 
NC_007492  Pfl01_3116  sterol-binding  40.68 
 
 
105 aa  42  0.003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.234067  normal 
 
 
-
 
NC_013124  Afer_1552  hypothetical protein  22.94 
 
 
145 aa  42  0.003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.781593  n/a   
 
 
-
 
NC_004578  PSPTO_2725  SCP-2 sterol transfer family protein  39.66 
 
 
105 aa  40  0.01  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>