Gene Pfl01_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3116 
Symbol 
ID3712803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3574947 
End bp3575264 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID 
Productsterol-binding 
Protein accessionYP_348845 
Protein GI77459338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.234067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG TAGCTGATGC CGTAAAAGCA ATGCAAGCCA AGTTCAACCC AGCCGCCGCT 
GCCGGTCTGG ATCTGGTCTT CGGTTTCAAC ATCACTGACG AAGACAAGCA ATACGCCCTG
ATCGTCAAAG ACGGCACCTG CGACATCCAG GAAGGCGAAA ACCCGGACGC CAACTGCACG
CTGGTGCTGG ACAGCGAAAC CCTCAAAGGC ATCGTCAGCG GCGAAACCGA CGGCATGCAG
GCGTTCATGG GCGGCAAGCT GCGCGTTGAA GGCGACATGA TGCTGTCGAT GAAACTGTCC
GAGCTGTTCC CCGCGTAA
 
Protein sequence
MTSVADAVKA MQAKFNPAAA AGLDLVFGFN ITDEDKQYAL IVKDGTCDIQ EGENPDANCT 
LVLDSETLKG IVSGETDGMQ AFMGGKLRVE GDMMLSMKLS ELFPA