10 homologs were found in PanDaTox collection
for query gene PsycPRwf_1940 on replicon NC_009524
Organism: Psychrobacter sp. PRwf-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009524  PsycPRwf_1940  hypothetical protein  100 
 
 
517 aa  1056    Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_0446  hypothetical protein  28.76 
 
 
485 aa  180  4.999999999999999e-44  Haemophilus somnus 129PT  Bacteria  normal  0.0309285  n/a   
 
 
-
 
NC_009524  PsycPRwf_0416  hypothetical protein  25.36 
 
 
479 aa  118  3e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.042502 
 
 
-
 
NC_008309  HS_0622  hypothetical protein  26.84 
 
 
417 aa  112  2.0000000000000002e-23  Haemophilus somnus 129PT  Bacteria  normal  0.200339  n/a   
 
 
-
 
NC_010322  PputGB1_1525  putative peptide signal  23.46 
 
 
490 aa  81.3  0.00000000000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2677  hypothetical protein  22.19 
 
 
482 aa  74.3  0.000000000005  Methylobacillus flagellatus KT  Bacteria  normal  0.297281  normal 
 
 
-
 
NC_011071  Smal_2184  conserved hypothetical protein; putative peptide signal  23.02 
 
 
484 aa  69.3  0.0000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4303  putative peptide signal  21.03 
 
 
498 aa  63.2  0.00000001  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.429805 
 
 
-
 
NC_009952  Dshi_1059  hypothetical protein  25.33 
 
 
434 aa  60.8  0.00000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0303  tetratricopeptide TPR_4  23.1 
 
 
453 aa  48.5  0.0003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
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