| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1940 |
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| Symbol | |
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| ID | 5204807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2407654 |
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| End bp | 2409207 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640600172 |
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| Product | hypothetical protein |
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| Protein accession | YP_001280830 |
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| Protein GI | 148653737 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT CGCACCTCTT AAGAACCCTC ACCACTTCTA CCTTATTGCT CAGCGCAGTT
TATAGTCCTC TGGTCTATGC GGCTGACGAT ATTCCTCCTG GATTTATCGA GGAGACTAGA
GATAATAATG ACCAGGCAGA TGAATTAATT AAACGTGAGC GCCAAGATAT TACCTTAGGC
ACGAACGTAC CAACAGCAAC CGTATCTAAG CAAGAAGCAC AAAAAGCACT AGATGAGCGC
AAAAAAGTTC AATCTATACA AGGCTATGAT TTAGAGGCTT TAAAAGCGGA CCCTGTAACT
TTTACAAAGT TTTTAAATGC CGCATTGGCA GCGCAGGATA TGGCCACTGT TAAAGAGCTG
CTCCCATATT ATAGGGCATT AGAAGTTAAT GATCCCATGC TAATTAAGTT CGCTGATGCC
TTGGTATATC GTAGTGAAGG ACAAAACAAA AAAGCTATTG CAATATATAA AGACATGTTG
GCAGACAACC CTGACTTTCA TCCAGTGCGT CTTAATATGG CCCAAGCGTT GTATGCTGAT
AAGCAGTATA CCGCTGCTGC AGACCAGTTG CAGAAGCTGC GTGGCGCGGA TATTCCACCA
CCGGTAATGG CCAATGTTGA TCGCTTAATT GAGCGCATCA AAGAGCAGGA GCAGTGGCGC
TTTAGTGCTT CTGCCAGCTA TGTGTATGAT AAGAACTTAA ATGGGGTACC TGAAAGGCAA
ATTGTAGATG CTCAATTAGG TGCCACAAGT AAGCCTGAAT CCGGCAAAGG TTTGCAGGTA
TCAGGAAGTG CGAGTAAACG TATTAACCTA GACAAAAACT TTTATGCTGA AGTGGGTGGT
AATGCCTCGC TAAGAGGCTA TTGGGATAAT AGTGAGTATA ATGATTATCT GGTCACAGCC
TCGACAGCCT TGGGTTATGA TGATGCCAAA AATGATGTGT CTATTAGTCC TTTTGTGACC
AAGCGCTTTT ATGGGGAAGA GCCGTATAGC TGGCGAAAGG GGGTGACGCT TAGTGGCTCA
CGTTGGGTGC AGCCAAAGCT CAAGCTGACG GCAACAGGCA TGTACTCTAA TGAAACCATA
GATGATGATG ACAAAGATCT GCGTGAAGCA GATGGCCTGT TTTTAGGGGT CAATGGTCTA
TATATTAAAG ATGCCAACGA GTATTTTTAT GGTGGTTTGG GTAGCTATAA AAATGATGTC
GATAAGACCA GCTTCTTAAG TTATGATAGA AATTCAGTAA ACGTGGGCTG GGGGCGTGAA
TGGAACCAAG GTATCTCTAC TTTAGCCTCA GCAAGCTATG CTATTAAAGA CTATGATAAG
CCTTCAGATG ATATCGCAGA TTTCTTTTAC CGAACTTATC GCGTAGAGGG TAATGATACC
CATCGCAAAG ACAAAACCAG CTCCTTAGGG TTGCAAGTTT GGAAGCGTGA TTTGACGGTA
CTAGGCTTAA CCCCACGCTT GGTATTTGAT TATGAGAAGA CCTCAAGTAA CTTCAAATAC
TATGATGACC GTGATGACAA AACAGCCACC ATTTTATTTA CTAAGACTTT CTAG
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| Protein sequence | MTHSHLLRTL TTSTLLLSAV YSPLVYAADD IPPGFIEETR DNNDQADELI KRERQDITLG
TNVPTATVSK QEAQKALDER KKVQSIQGYD LEALKADPVT FTKFLNAALA AQDMATVKEL
LPYYRALEVN DPMLIKFADA LVYRSEGQNK KAIAIYKDML ADNPDFHPVR LNMAQALYAD
KQYTAAADQL QKLRGADIPP PVMANVDRLI ERIKEQEQWR FSASASYVYD KNLNGVPERQ
IVDAQLGATS KPESGKGLQV SGSASKRINL DKNFYAEVGG NASLRGYWDN SEYNDYLVTA
STALGYDDAK NDVSISPFVT KRFYGEEPYS WRKGVTLSGS RWVQPKLKLT ATGMYSNETI
DDDDKDLREA DGLFLGVNGL YIKDANEYFY GGLGSYKNDV DKTSFLSYDR NSVNVGWGRE
WNQGISTLAS ASYAIKDYDK PSDDIADFFY RTYRVEGNDT HRKDKTSSLG LQVWKRDLTV
LGLTPRLVFD YEKTSSNFKY YDDRDDKTAT ILFTKTF
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