7 homologs were found in PanDaTox collection
for query gene Ppha_2870 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_2870  NgoMIIIM  100 
 
 
215 aa  451  1.0000000000000001e-126  Pelodictyon phaeoclathratiforme BU-1  Bacteria  unclonable  0.0000000652337  n/a   
 
 
-
 
NC_013205  Aaci_1133  Restriction endonuclease, type II, Eco29kI  45.24 
 
 
207 aa  142  4e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1530  restriction endonuclease R.NgoMIII  47.17 
 
 
209 aa  139  3e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000268327  unclonable  0.000000000126614 
 
 
-
 
NC_013441  Gbro_0535  hypothetical protein  38.02 
 
 
201 aa  126  2.0000000000000002e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0863902  n/a   
 
 
-
 
NC_009767  Rcas_0067  hypothetical protein  43.71 
 
 
204 aa  115  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.0000131857  hitchhiker  0.00106792 
 
 
-
 
NC_009523  RoseRS_4009  hypothetical protein  44.72 
 
 
512 aa  110  2.0000000000000002e-23  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00000517991  normal 
 
 
-
 
NC_013441  Gbro_0536  hypothetical protein  32.75 
 
 
304 aa  79.7  0.00000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.347384  n/a   
 
 
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