Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4009 |
Symbol | |
ID | 5210992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5015550 |
End bp | 5017088 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640597598 |
Product | hypothetical protein |
Protein accession | YP_001278304 |
Protein GI | 148658099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000517991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAC ATTCTTTCAT CTTCGAAGAC CAGGAGGATG TCGTGATCTT CCGTGATCCG GCATTCGAGC AGAACAAGCG GCATGCCATT CATCGTTGGG TTCCGTGGAT TGCCGGGTTT TCCGCTGATT TCGTCGTCGA TGCCTTGCGG CGCTATCTTC CGGATGGAGC CGGAAGAAAC ACGTGCGTCC TCGATCCATT CGCTGGAGTA GGAACAACCC TGGTCGAAAG CATCCGTCAC GGACACAACG CGATTGGATT CGAGATTAAC CCCTTCGCAG CGCTTGCCGC TCGCGTGAAA TGCACAGCGT TTCTGCTCGA TCCCGCGTCG GTACGAGCGC ATATCGTGGC ATTTGAACAG CGCGCCAGGC GCATAACAGA AGCGATTGAT CAAGCGTGGG CGTGCGGCGA TGACCTCGCA CGGCTTCTCC CTGCGCCTGC GTCCCGTCCA CCGGCCGCTT TTCGATCCCG TGTTCCCTTC TTCAGTCCGG CAGTCGAACG CAAAGTCCTG CATTGTCTCG ATCTCATTCA CGCCGTACCC GATCCGCAGG TGCGTGATCT GATGCTGCTT GCATTCGGTT CCATCCTGGT TCACGTATCG AACTACTCAT ACGAGCCGAG TCTCGGATCA CGCTCTGCCG TTGGGAAAGC TGATGTCCTG AACGCAGACG TGGCCGGTCT GCTCAGCGCC CGGCTTTACG ACATGGAACA CGATATTATC GTCTATCGCC GCGACATGAT GCAATTTCAA CCGTTTCCCG AGGGAAAGGT CATCAACGAC GACTCACGAC AGGTGCGTCA TATACTGCCT GATTCGAGCA TTGATATCGT TATCACATCA CCTCCGTATC TTAATCCTCT CGAAAAAATA AATCTTGCAA AAAGCATCGT ACAAGAACTT TTGTCACAGA ATATCCATCC GCTACCGCCT CCTATCTTTG AAGGAGCGGG AGTATATGCC CTATACTATA GTGGAAGTCA TGACTTGTAT GCATCTCTGG CTCTATCTTC TGGAAAGGAA GAGAAACCCA TCTATGTAGG AAAAGCCGTG CCCCCTGGCG CCAGGATCGG CGGATATGGG CTTAACACTC CACCGGGTGC TGTTCTCTTC AATCGCCTGA GAGAGCACGC TCTCTCAATT GAACAGGCGC AAGACCTCGA TCTGACAGAC TTCCGATGTC GATATCTGGT TGTTGATGAT ATCTGGATTC CGCTGGCCGA GACGTTGCTC ATCGAAATGT ACCAGCCGGT ATGGAATACG ATTGTCCCCG GCTTCGGCAA TCATGCCCCC GGAAAAGGGA GACATAAGCA ACCTGCAACC TGCAACCTGC AACCTGCAAC CTGCAACCTG CAACCTGTAA CGTGCAACCT GCAACCTGTA ACGTGCAACC TGCAACCTGC AACCTGTAAC GTACAACCTC CAACCTGCAA CCTGCAACCT TCCCGCTCCC TCTCCATTTC CTGCGCCACA CTTGCATATC TAAACGTTAT CAAGTATACT TCTCACATCC CCCTCTTAAT GGTCAACAGA TGGTTCTGA
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Protein sequence | MIQHSFIFED QEDVVIFRDP AFEQNKRHAI HRWVPWIAGF SADFVVDALR RYLPDGAGRN TCVLDPFAGV GTTLVESIRH GHNAIGFEIN PFAALAARVK CTAFLLDPAS VRAHIVAFEQ RARRITEAID QAWACGDDLA RLLPAPASRP PAAFRSRVPF FSPAVERKVL HCLDLIHAVP DPQVRDLMLL AFGSILVHVS NYSYEPSLGS RSAVGKADVL NADVAGLLSA RLYDMEHDII VYRRDMMQFQ PFPEGKVIND DSRQVRHILP DSSIDIVITS PPYLNPLEKI NLAKSIVQEL LSQNIHPLPP PIFEGAGVYA LYYSGSHDLY ASLALSSGKE EKPIYVGKAV PPGARIGGYG LNTPPGAVLF NRLREHALSI EQAQDLDLTD FRCRYLVVDD IWIPLAETLL IEMYQPVWNT IVPGFGNHAP GKGRHKQPAT CNLQPATCNL QPVTCNLQPV TCNLQPATCN VQPPTCNLQP SRSLSISCAT LAYLNVIKYT SHIPLLMVNR WF
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