5 homologs were found in PanDaTox collection
for query gene Pmen_3974 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_3974  hypothetical protein  100 
 
 		 173 aa  356  8e-98  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.0829411 
 
 
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NC_002947  PP_3882  phage terminase, small subunit, putative  25 
 
 		 155 aa  48.1  0.00006  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
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NC_009012  Cthe_1723  P27 family phage terminase small subunit  30.3 
 
 		 160 aa  43.9  0.001  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
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NC_007204  Psyc_0465  phage terminase, small subunit  25.19 
 
 		 157 aa  42.7  0.003  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.371651 
 
 
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NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  22.58 
 
 		 170 aa  42  0.004  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
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