12 homologs were found in PanDaTox collection
for query gene Pcar_1941 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_1941  hypothetical protein  100 
 
 
165 aa  340  7e-93  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.108561  n/a   
 
 
-
 
NC_007517  Gmet_1280  hypothetical protein  32.65 
 
 
191 aa  80.1  0.00000000000001  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000000165171 
 
 
-
 
NC_008554  Sfum_2072  hypothetical protein  26.42 
 
 
199 aa  76.6  0.0000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0102937  normal 
 
 
-
 
NC_002939  GSU1890  hypothetical protein  31.17 
 
 
191 aa  73.2  0.000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.626656  n/a   
 
 
-
 
NC_008609  Ppro_0971  hypothetical protein  30.07 
 
 
188 aa  72.8  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000000413362  n/a   
 
 
-
 
NC_009483  Gura_2975  hypothetical protein  29.25 
 
 
191 aa  60.8  0.000000008  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000186367  n/a   
 
 
-
 
NC_011146  Gbem_0866  protein of unknown function DUF1239  24.83 
 
 
158 aa  60.5  0.00000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0475041  n/a   
 
 
-
 
NC_010814  Glov_2169  protein of unknown function DUF1239  26.32 
 
 
193 aa  59.3  0.00000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3393  protein of unknown function DUF1239  26.67 
 
 
158 aa  55.1  0.0000005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_0509  hypothetical protein  24.09 
 
 
190 aa  42.4  0.003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0529514  n/a   
 
 
-
 
NC_014230  CA2559_04210  hypothetical protein  33.85 
 
 
188 aa  40.8  0.008  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.215001  n/a   
 
 
-
 
NC_013132  Cpin_0507  protein of unknown function DUF1239  27.5 
 
 
184 aa  40.8  0.009  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
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