Gene Cpin_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0507 
Symbol 
ID8356613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp606699 
End bp607253 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID644962653 
Productprotein of unknown function DUF1239 
Protein accessionYP_003120206 
Protein GI256419553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA TTATAGCGCG CATCGCGTTG TTCTTTTCCC TGCTGACAAT CGTAGCCTGT 
GAAAATGACA TCAATGCCAT TATGAACATG GACAAACAAC TGGCCGCCGT AGAGGAGGGT
AAGGATATCG AGTCCATGTA CAGCCAGACT GGTCGTGTAA AGGCCAAGCT GACAGCTCCT
ACTATGCTCA GGCATCTGAA GCCGCCGGTA TTCGTAGAAT TCAATACCGG GCTTAAAGTG
CTGTTTTACA ATGACACCCT CGGCGTAGAG AGTACACTGA CTGCCCGTTA TGGCAAATAC
TTCGAAAACG ACGCCAACGT CTTCCTGAAA GATCATGTGG TGGTTATCAA TAAGAAAGGA
GAAAGACTCG ATTGTGAAGA ACTGAACTGG GATTCCAAGC AGCAGAAGTT CCTTTCTAAT
AAACCAGTGC GTATCAGTAC GGTAACTGAC ACTTTATATG GTACCGGACT GGAATCCAAC
CAGGATTTCA GTGATTATAC CATACTGCAT CCGAGTGGTC CGTTTGTAAT CCAGGACAGC
ACGATGATGC AATAA
 
Protein sequence
MNNIIARIAL FFSLLTIVAC ENDINAIMNM DKQLAAVEEG KDIESMYSQT GRVKAKLTAP 
TMLRHLKPPV FVEFNTGLKV LFYNDTLGVE STLTARYGKY FENDANVFLK DHVVVINKKG
ERLDCEELNW DSKQQKFLSN KPVRISTVTD TLYGTGLESN QDFSDYTILH PSGPFVIQDS
TMMQ