9 homologs were found in PanDaTox collection
for query gene PSPTO_4606 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_4606  hypothetical protein  100 
 
 
132 aa  269  1e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.84506  n/a   
 
 
-
 
NC_007520  Tcr_0331  hypothetical protein  27.91 
 
 
136 aa  60.8  0.000000006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1123  hypothetical protein  27.27 
 
 
138 aa  55.5  0.0000003  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0518  hypothetical protein  26.77 
 
 
154 aa  52  0.000003  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1700  hypothetical protein  28.23 
 
 
132 aa  49.7  0.00001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2899  hypothetical protein  31.5 
 
 
128 aa  46.2  0.0001  Enterobacter sp. 638  Bacteria  normal  0.304813  normal  0.409222 
 
 
-
 
NC_009665  Shew185_0560  hypothetical protein  29.27 
 
 
175 aa  45.4  0.0002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0585  hypothetical protein  29.27 
 
 
175 aa  45.4  0.0002  Shewanella baltica OS195  Bacteria  normal  normal  0.599707 
 
 
-
 
NC_011663  Sbal223_0591  hypothetical protein  29.27 
 
 
175 aa  45.4  0.0002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
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