5 homologs were found in PanDaTox collection
for query gene PSPTO_3397 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_3397  tail fiber assembly domain protein  100 
 
 
180 aa  368  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2289  hypothetical protein  36.47 
 
 
167 aa  57.4  0.0000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0429023 
 
 
-
 
NC_011312  VSAL_I1046  hypothetical protein, putative phage gene  34.92 
 
 
147 aa  45.4  0.0004  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0864  tail assembly chaperone gp38  33.73 
 
 
184 aa  43.1  0.002  Serratia proteamaculans 568  Bacteria  normal  0.344022  hitchhiker  0.00356557 
 
 
-
 
NC_009801  EcE24377A_1287  hypothetical protein  36.84 
 
 
88 aa  42.7  0.003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
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