Gene PSPTO_3397 details

Gene Information

• Locus tag: PSPTO_3397
• ID: 1185057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 3838779
• End bp: 3839321
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637394748
• Product: tail fiber assembly domain protein
• Protein accession: NP_793180
• Protein GI: 28870561

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAATG TATTAAATGC CCGCAATCCG TACTGGTCTT CTCAGGCCCG CGCTACCATC 
GAATTGATGG TGGTTTTCGA GGGGCTGGAG GAAACACATG GGGAGTTACC GTTCACGGCG 
TCTCCCCACG ATCCTGAGCC CCACGGTGTA GAACTTTACG AACGAGCCCT GGCGGGTGAG 
TTTGGCCCGG TTCAAGACAC GCCGATTGAG CTGGTGCGTG TGCAGGTCAT GTGCGCTCGT 
GGCGACCGTT CGGCTGCGGC CACTGCCCGT ATTGACGAGC TGGTCAATCA GTACGAGGAG 
TTGCAGGACG CCGTGTCACT GGATATGGCG ACCGACGACC AGCGCAAAGC GCTGCCCGCT 
GTCAGGGCTG AGATTGATGC GTATCGTCTG TATCGCGTGC AGCTCGGCCA GCTCGATACG 
AAGCCTGGCT ACCCGCTGGA CTTTGAATGG CCTACGCCGC CTGCGAATCC GTTCGTATAC 
GAGCCGCCCG AGCCGGAAGC CCCCGCGCAG GACGTCAGCG ACGACGATCA GCAAAGCACC 
TAA 

 

Protein sequence

MSNVLNARNP YWSSQARATI ELMVVFEGLE ETHGELPFTA SPHDPEPHGV ELYERALAGE 
FGPVQDTPIE LVRVQVMCAR GDRSAAATAR IDELVNQYEE LQDAVSLDMA TDDQRKALPA 
VRAEIDAYRL YRVQLGQLDT KPGYPLDFEW PTPPANPFVY EPPEPEAPAQ DVSDDDQQST