8 homologs were found in PanDaTox collection
for query gene PSPTO_1614 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1614  hypothetical protein  100 
 
 
179 aa  367  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0254992  n/a   
 
 
-
 
NC_007005  Psyr_3766  hypothetical protein  84.27 
 
 
243 aa  313  7e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.17281 
 
 
-
 
NC_009436  Ent638_0389  hypothetical protein  36.11 
 
 
247 aa  54.7  0.0000006  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1279  hypothetical protein  41.33 
 
 
245 aa  50.1  0.00002  Pseudomonas putida W619  Bacteria  normal  0.72536  normal 
 
 
-
 
NC_007005  Psyr_0163  hypothetical protein  33.33 
 
 
235 aa  42.4  0.003  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00127626  normal  0.968152 
 
 
-
 
NC_010501  PputW619_0891  hypothetical protein  29.87 
 
 
264 aa  42.7  0.003  Pseudomonas putida W619  Bacteria  normal  normal  0.643944 
 
 
-
 
NC_012560  Avin_04900  hypothetical protein  30.77 
 
 
253 aa  42.4  0.004  Azotobacter vinelandii DJ  Bacteria  normal  0.475005  n/a   
 
 
-
 
NC_012880  Dd703_4029  hypothetical protein  29.52 
 
 
272 aa  40.8  0.009  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
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