Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1279 |
Symbol | |
ID | 6110207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1419024 |
End bp | 1419761 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641621053 |
Product | hypothetical protein |
Protein accession | YP_001748153 |
Protein GI | 170720465 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.72536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTT TCAGCGTTAA TGCCACGCCT GTCGTACGCC AGGAAAACAT TCTGCTACCG CCCACAAAGT CGGAGGAGGG TACTGCACAA CCAGGGTGCA AGGTGAGTTT GTCTGATGAG GCCCTTAACG ACGCCAGAAA CAAGGACGAG GTTCGAGCAC TTCATGCACG GATCTATGGA ACACCGTCGC TCGGGGATCG AATCAGTTAT AGCTATCGAA CACGGGGAGA AGAAAAATTC AAGAATGAGC CGCCTCCAGA AAATTACACG CCTGAACAGG CTGAACGCCA CCGGCAAGCC CTGGATTATC TGGTAGGTAT CGAAAAGCTC TCAGGGGTGG AGACTCAGTT TGAGGAAAAC CCGTTTTGGG GGTTGGACCG CGCTCATCTA GTGGCAATCG AGCAGGATGA AAACAGTTAT ACCGAAGTGG AACGTTATGC GGCAGCTAGA GCAAAAACAG CATTGGACAA TATTTTCTTC ACACGTCTCA GCGACCATGC CTATAACACA GGCGACCTAA GACCCGTGTT CAAGGGATAT CTTGAGTATC TGGATAACTT GACCGACGTC GAACGCCTCA ATTTTCCAGC CGATGAACGT GAACGGGTAG CCGGTCTTTT AGCTCGTGCG CAAAGCGAAT CTGGCAGCCT CCCCGAAGGC TTCTCCCTCT GGCAATACAT GAACTGGGCC CCTGAAGGCC GCCTCGACCT CGAAGCGCTG CTGAACCCCG CGTCTTAG
|
Protein sequence | MKIFSVNATP VVRQENILLP PTKSEEGTAQ PGCKVSLSDE ALNDARNKDE VRALHARIYG TPSLGDRISY SYRTRGEEKF KNEPPPENYT PEQAERHRQA LDYLVGIEKL SGVETQFEEN PFWGLDRAHL VAIEQDENSY TEVERYAAAR AKTALDNIFF TRLSDHAYNT GDLRPVFKGY LEYLDNLTDV ERLNFPADER ERVAGLLARA QSESGSLPEG FSLWQYMNWA PEGRLDLEAL LNPAS
|
| |