3 homologs were found in PanDaTox collection
for query gene PSPTO_1375 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_1375  type III effector HopM1  100 
 
 		 712 aa  1442    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0101421  n/a   
 
 
-
 
NC_007005  Psyr_1186  type III effector HopM1  64.9 
 
 		 718 aa  917    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.0707254 
 
 
-
 
NC_009439  Pmen_0020  hypothetical protein  26.83 
 
 		 743 aa  95.5  3e-18  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
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