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3 homologs were found in PanDaTox collection
for query gene
Pmen_0020
on replicon NC_009439
Organism:
Pseudomonas mendocina ymp
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439
Pmen_0020
hypothetical protein
100
743 aa
1501
Pseudomonas mendocina ymp
Bacteria
normal
1
normal
1
-
NC_007005
Psyr_1186
type III effector HopM1
27.46
718 aa
99.4
2e-19
Pseudomonas syringae pv. syringae B728a
Bacteria
normal
1
normal
0.0707254
-
NC_004578
PSPTO_1375
type III effector HopM1
24.48
712 aa
97.1
1e-18
Pseudomonas syringae pv. tomato str. DC3000
Bacteria
normal
0.0101421
n/a
-
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