9 homologs were found in PanDaTox collection
for query gene PSPTO_0878 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_0878  hypothetical protein  100 
 
 		 105 aa  211  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.962388  n/a   
 
 
-
 
NC_011204  SeD_B0014  type II secretion system protein  78.75 
 
 		 322 aa  140  5e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.368313  normal  1 
 
 
-
 
NC_004578  PSPTO_4734  hypothetical protein  89.33 
 
 		 75 aa  140  6e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0582  type II secretion system protein  76.25 
 
 		 99 aa  135  1e-31  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0609  type II secretion system protein  76.25 
 
 		 99 aa  135  1e-31  Shewanella baltica OS195  Bacteria  normal  1  normal  0.188984 
 
 
-
 
NC_008761  Pnap_4769  ExeA-like protein  74.29 
 
 		 80 aa  113  7.999999999999999e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.43553 
 
 
-
 
NC_009999  Sbal195_4655  AAA ATPase  42.11 
 
 		 85 aa  74.3  0.0000000000005  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0165  AAA ATPase  40.7 
 
 		 323 aa  73.9  0.0000000000007  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_004632  PSPTO_B0037  hypothetical protein  60.61 
 
 		 69 aa  42.4  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.22263  n/a   
 
 
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