8 homologs were found in PanDaTox collection
for query gene Pnap_4769 on replicon NC_008761
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008761  Pnap_4769  ExeA-like protein  100 
 
 
80 aa  162  2.0000000000000002e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.43553 
 
 
-
 
NC_011204  SeD_B0014  type II secretion system protein  75.71 
 
 
322 aa  114  5e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.368313  normal 
 
 
-
 
NC_004578  PSPTO_0878  hypothetical protein  74.29 
 
 
105 aa  113  7.999999999999999e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.962388  n/a   
 
 
-
 
NC_009665  Shew185_0582  type II secretion system protein  74.29 
 
 
99 aa  110  5e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0609  type II secretion system protein  74.29 
 
 
99 aa  110  5e-24  Shewanella baltica OS195  Bacteria  normal  normal  0.188984 
 
 
-
 
NC_004578  PSPTO_4734  hypothetical protein  74.29 
 
 
75 aa  110  6e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009999  Sbal195_4655  AAA ATPase  48.57 
 
 
85 aa  77  0.00000000000009  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0165  AAA ATPase  47.14 
 
 
323 aa  75.1  0.0000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
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