5 homologs were found in PanDaTox collection
for query gene PSPTO_0876 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_0876  type III effector HopD1  100 
 
 		 705 aa  1429    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RS05468  hypothetical protein  36.75 
 
 		 643 aa  286  9e-76  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0993546 
 
 
-
 
NC_004578  PSPTO_4724  type III effector HopD  83.83 
 
 		 181 aa  270  5.9999999999999995e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.543732  n/a   
 
 
-
 
NC_004578  PSPTO_4722  type III effector HopAO1  62.63 
 
 		 468 aa  224  6e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.37693  n/a   
 
 
-
 
NC_008752  Aave_2802  hypothetical protein  25.8 
 
 		 727 aa  98.2  5e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0434063  normal  0.524127 
 
 
-
 
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