9 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_52198 on replicon NC_011681
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011681  PHATRDRAFT_52198  regulatory proteasome non-atpase subunit 6  100 
 
 
405 aa  828    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009356  OSTLU_36468  predicted protein  47.14 
 
 
421 aa  317  3e-85  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.636278  n/a   
 
 
-
 
NC_009044  PICST_89414  predicted protein  42.35 
 
 
422 aa  315  8e-85  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.607018 
 
 
-
 
BN001302  ANIA_10519  proteasome regulatory particle subunit (RpnF), putative (AFU_orthologue; AFUA_1G06300)  48.01 
 
 
424 aa  311  9e-84  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_006683  CNN00870  endopeptidase, putative  42.56 
 
 
423 aa  278  9e-74  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006686  CND01880  endopeptidase, putative  26.96 
 
 
479 aa  82  0.00000000000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009355  OSTLU_19323  predicted protein  23.5 
 
 
442 aa  72.8  0.00000000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.158987  n/a   
 
 
-
 
BN001303  ANIA_04783  COP9 signalosome complex subunit 2 (Signalosome subunit 2) [Source:UniProtKB/Swiss-Prot;Acc:Q5B3U7]  22.01 
 
 
506 aa  68.9  0.0000000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.371284  normal 
 
 
-
 
NC_011681  PHATRDRAFT_28818  COP9 SigNalosome subunit 2  25.54 
 
 
404 aa  55.8  0.000001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  hitchhiker  0.000148677  n/a   
 
 
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