| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_52198 |
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| Symbol | RPN6 |
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| ID | 7202310 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 123724 |
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| End bp | 124978 |
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| Gene Length | 1255 bp |
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| Protein Length | 405 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | regulatory proteasome non-atpase subunit 6 |
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| Protein accession | XP_002181486 |
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| Protein GI | 219122301 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACAA ATACGGAGAA GACAAGTACG AAGGCAATGC AGCTAAAAGA GCGTGCCGTC
TATGACCTGA CTCGTGCCTA TTGTGCGGCT CAACAGTACG ACGATGTGGT CTCATTCTTG
ACGGGTCAAA CTGGTCAAAC TTTCTTGGCG CAAATGACCA AGGCTAAAAC AGCCAAAATT
GTTCGCCAAA TGCTTGACAT TGTCATTCAA GCGGCCCCGG AAGCCCTGCA AATGCAAGAA
TCCGTCGCCC GAGCGATTGT AGCCTGGACA GAATCGGAGA AACGGAATTT TTTGCGACAA
CGCGTGGAAG CCAAGCTCGC TACCATACTC TTTCACCGAG GTGCTTACGT TGACGCGTTA
GAACTTTGCG ATCGTCTATT GACAGAACTT AAAAAGCTCG ACGATAAGGC CCTGCTTGTC
GAAACTCACT TGCTTGAATC CAAAATACAC TTTGGGCTAC GCAACGTCCC CAAGGCCAAG
GCTGCCTTGA CAGCTTCCCG CACCGCCGCC AACGCCATTT ACGTTGCGCC CGCGCTCCAA
GCCGAAATTG ATTCCATGTC GGGCACCATT CACGTAGAAG AAGGTGACTA TAACACAGCG
CACTCATACT TTCTCGAAGC CTTCGAACAA TTGGACCAAA TGAACGAAAC GGCCCAAGCA
ACAACTGCCC TGAAGTATAT GCTGTTGTGC AAAATTCTCG ATGCTTTACG AGCTGCCTTG
CATCTTTCTA GTCAAGGAGC CGTAGGCATG AAGACTAACA AGGCAGAAGT CGACTTATCG
GGACTCTTGA CGGGGAAACA AGGCGTCAAG TATGCCGGTA GAGAAGTTGA AGCCATGTCT
GCCATTGCCA CAGCCTCCGC CAACAGGAAT CTTCAAGAAT TTGAGCGAGT GCTGCAAACT
TACGCAGACG AGTTGCAACA AGACTTGTTG ATCAAGCACC ACTTGCATAT CTTACAGGAG
CAACTGCTTG AATCGAATCT TATTCGTATC ATCGAACCGT ACAGCTGCGT GGAATTGAGT
CACATTGCCG CGATGATTGA GCTACCCGTG GCGACCGTGG AACGCAAACT TTCGCAGATG
ATCCTAGATG GCAAGTTTCT TGGCATTCTA GATCAAGGGA AGGGACAGTT GGTCGTGTAC
GAGGAGTCGG ATCCGGACGA AGCTATGGAG AAGGGGCTGC AAGTAATTGC CAACATGGAT
CAAGTGGTGA CAAGTTTGTT TGAGCGAAGC AAAGCGCTTC GTACTATGAT GATTT
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| Protein sequence | MITNTEKTST KAMQLKERAV YDLTRAYCAA QQYDDVVSFL TGQTGQTFLA QMTKAKTAKI
VRQMLDIVIQ AAPEALQMQE SVARAIVAWT ESEKRNFLRQ RVEAKLATIL FHRGAYVDAL
ELCDRLLTEL KKLDDKALLV ETHLLESKIH FGLRNVPKAK AALTASRTAA NAIYVAPALQ
AEIDSMSGTI HVEEGDYNTA HSYFLEAFEQ LDQMNETAQA TTALKYMLLC KILDALRAAL
HLSSDLSGLL TGKQGVKYAG REVEAMSAIA TASANRNLQE FERVLQTYAD ELQQDLLIKH
HLHILQEQLL ESNLIRIIEP YSCVELSHIA AMIELPVATV ERKLSQMILD GKFLGILDQG
KGQLVVYEES DPDEAMEKGL QVIANMDQVV TSLFERSKAL RTMMI
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