14 homologs were found in PanDaTox collection
for query gene PC1_4262 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_4262  hypothetical protein  100 
 
 
475 aa  992    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0989  group-specific protein  38.57 
 
 
450 aa  277  4e-73  Bacillus cereus E33L  Bacteria  decreased coverage  0.000631677  n/a   
 
 
-
 
NC_005945  BAS1002  hypothetical protein  38.42 
 
 
450 aa  276  8e-73  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.00204136  n/a   
 
 
-
 
NC_007530  GBAA_1073  hypothetical protein  38.42 
 
 
450 aa  276  8e-73  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1155  hypothetical protein  38.42 
 
 
450 aa  276  8e-73  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0987  hypothetical protein  38.42 
 
 
450 aa  275  1.0000000000000001e-72  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4199  hypothetical protein  38.29 
 
 
450 aa  275  1.0000000000000001e-72  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1106  hypothetical protein  38.57 
 
 
450 aa  275  2.0000000000000002e-72  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1233  hypothetical protein  38.02 
 
 
450 aa  273  5.000000000000001e-72  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1170  hypothetical protein  37.33 
 
 
450 aa  268  2e-70  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1631  hypothetical protein  26.29 
 
 
473 aa  121  3e-26  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3108  hypothetical protein  25.87 
 
 
448 aa  103  8e-21  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.00000000141224  n/a   
 
 
-
 
NC_011145  AnaeK_0598  hypothetical protein  21.58 
 
 
441 aa  63.5  0.000000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0150  lipoprotein  33.8 
 
 
251 aa  45.8  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
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