Gene Cpin_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0150 
Symbol 
ID8356249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp182282 
End bp183037 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content45% 
IMG OID644962293 
Productlipoprotein 
Protein accessionYP_003119853 
Protein GI256419200 
COG category[S] Function unknown 
COG ID[COG3779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA ATTCTATTTT TTACGCGAAA GGCGATTCTC CTGAAATGAT TCAGGCTTTT 
GAGCATGCAA GAAAGACATT TAAATATTTT TGGCGCGAGC TCAGCTGGGA AGCAAGGCGT
ATTGTTCCCG GTGTAGATCT TGCCTGTGTA AAAGTCGCAT TTGCCCAGCA ATTTCCCGGT
GAAGAAGAAC CAACCATAGA GCATATGTGG ATCAATGACG TGTATTTTGA CGGTGATACT
GTCAGCGGTA CACTGATCAA TGATCCTGAG TCACTGACGA ATGTAAAGAA TGGCGATGCT
GTTACGGTTC CGCTTGAGCA GGTAAGCGAC TGGCTAATGT TGAGTATGGG AAAGACCTAT
GGAGGCTTCA GTATTCATCA GTTACGTTCA ACGATGTCTC CGGAAGAAAG AGCGTCACAC
GATGAAGCCT GGGGGATGGA TTTCGGCGAT TATAACAATA TTGAAGTCGT TCGTGATCAG
GATACGCACC CGGAACACCT GGTAGAACAT CCTATGAGCA TCAATATGAA AGATGGTTTT
GTGAAATTCC TGCAGGATTA TCCGCAGCAA ATGATCAACG CAGATGAACA GGGTTATACC
TTATTGCATA GGGAAACAAT TGCAGGTAAC AAGACCTCTG TAGTGCTACT ATTGCAGCAG
GGCGTAAATA CAGGTAGCAA AACAAACAGT GGCAAAACAG CCCTTGATTT TGCAAGACAA
TTGGGATGGG AGCACATCAT TCCATTGCTG CATTGA
 
Protein sequence
MADNSIFYAK GDSPEMIQAF EHARKTFKYF WRELSWEARR IVPGVDLACV KVAFAQQFPG 
EEEPTIEHMW INDVYFDGDT VSGTLINDPE SLTNVKNGDA VTVPLEQVSD WLMLSMGKTY
GGFSIHQLRS TMSPEERASH DEAWGMDFGD YNNIEVVRDQ DTHPEHLVEH PMSINMKDGF
VKFLQDYPQQ MINADEQGYT LLHRETIAGN KTSVVLLLQQ GVNTGSKTNS GKTALDFARQ
LGWEHIIPLL H