Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0150 |
Symbol | |
ID | 8356249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 182282 |
End bp | 183037 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962293 |
Product | lipoprotein |
Protein accession | YP_003119853 |
Protein GI | 256419200 |
COG category | [S] Function unknown |
COG ID | [COG3779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA ATTCTATTTT TTACGCGAAA GGCGATTCTC CTGAAATGAT TCAGGCTTTT GAGCATGCAA GAAAGACATT TAAATATTTT TGGCGCGAGC TCAGCTGGGA AGCAAGGCGT ATTGTTCCCG GTGTAGATCT TGCCTGTGTA AAAGTCGCAT TTGCCCAGCA ATTTCCCGGT GAAGAAGAAC CAACCATAGA GCATATGTGG ATCAATGACG TGTATTTTGA CGGTGATACT GTCAGCGGTA CACTGATCAA TGATCCTGAG TCACTGACGA ATGTAAAGAA TGGCGATGCT GTTACGGTTC CGCTTGAGCA GGTAAGCGAC TGGCTAATGT TGAGTATGGG AAAGACCTAT GGAGGCTTCA GTATTCATCA GTTACGTTCA ACGATGTCTC CGGAAGAAAG AGCGTCACAC GATGAAGCCT GGGGGATGGA TTTCGGCGAT TATAACAATA TTGAAGTCGT TCGTGATCAG GATACGCACC CGGAACACCT GGTAGAACAT CCTATGAGCA TCAATATGAA AGATGGTTTT GTGAAATTCC TGCAGGATTA TCCGCAGCAA ATGATCAACG CAGATGAACA GGGTTATACC TTATTGCATA GGGAAACAAT TGCAGGTAAC AAGACCTCTG TAGTGCTACT ATTGCAGCAG GGCGTAAATA CAGGTAGCAA AACAAACAGT GGCAAAACAG CCCTTGATTT TGCAAGACAA TTGGGATGGG AGCACATCAT TCCATTGCTG CATTGA
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Protein sequence | MADNSIFYAK GDSPEMIQAF EHARKTFKYF WRELSWEARR IVPGVDLACV KVAFAQQFPG EEEPTIEHMW INDVYFDGDT VSGTLINDPE SLTNVKNGDA VTVPLEQVSD WLMLSMGKTY GGFSIHQLRS TMSPEERASH DEAWGMDFGD YNNIEVVRDQ DTHPEHLVEH PMSINMKDGF VKFLQDYPQQ MINADEQGYT LLHRETIAGN KTSVVLLLQQ GVNTGSKTNS GKTALDFARQ LGWEHIIPLL H
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