7 homologs were found in PanDaTox collection
for query gene Nmar_0854 on replicon NC_010085
Organism: Nitrosopumilus maritimus SCM1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010085  Nmar_0854  AsnC family transcriptional regulator  100 
 
 
72 aa  142  2e-33  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.000145562 
 
 
-
 
NC_008228  Patl_0162  AsnC family transcriptional regulator  36.11 
 
 
142 aa  49.3  0.00002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_12100  transcriptional regulator, AsnC family  34.25 
 
 
93 aa  45.1  0.0003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0479216  n/a   
 
 
-
 
NC_013757  Gobs_3337  transcriptional regulator, AsnC family  34.25 
 
 
95 aa  42.4  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4124  transcriptional regulator, AsnC family  32.88 
 
 
94 aa  42.4  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0029  AsnC family transcriptional regulator  31.51 
 
 
94 aa  42  0.003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0598  AsnC family transcriptional regulator  31.94 
 
 
76 aa  40  0.01  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>