13 homologs were found in PanDaTox collection
for query gene Nham_4446 on replicon NC_007960
Organism: Nitrobacter hamburgensis X14



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007960  Nham_4446  type IV secretory pathway, VirB3-like  100 
 
 		 98 aa  202  1e-51  Nitrobacter hamburgensis X14  Bacteria  normal  0.593094  n/a   
 
 
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NC_009622  Smed_6406  type IV secretory pathway VirB3 family protein  39.78 
 
 		 99 aa  63.5  0.0000000008  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
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NC_009669  Oant_4563  type IV secretory pathway VirB3 family protein  34.38 
 
 		 99 aa  60.5  0.000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.185995  n/a   
 
 
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NC_007798  NSE_0864  type IV secretion system protein VirB3  32.95 
 
 		 98 aa  55.5  0.0000002  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
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NC_012792  Vapar_5815  type IV secretory pathway VirB3 family protein  36.67 
 
 		 122 aa  51.6  0.000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_008242  Meso_4178  type IV secretory pathway, VirB3-like  33.7 
 
 		 99 aa  51.2  0.000005  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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NC_008790  CJJ81176_pTet0028  cmgB3/4  34.09 
 
 		 922 aa  50.8  0.000007  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
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NC_002978  WD0859  type IV secretion system protein VirB3  31.76 
 
 		 98 aa  49.7  0.00001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
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NC_006369  lpl0152  hypothetical protein  38.57 
 
 		 93 aa  43.9  0.0007  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
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NC_012040  Cla_a009  secretion/conjugal transfer ATPase VirB3/4  30.88 
 
 		 924 aa  43.9  0.0007  Campylobacter lari RM2100  Bacteria  normal  1  n/a   
 
 
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NC_006368  lpp0170  hypothetical protein  37.14 
 
 		 93 aa  43.1  0.001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
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NC_011370  Rleg2_6205  type IV secretory pathway VirB3 family protein  33.33 
 
 		 108 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37291  normal  0.0242108 
 
 
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NC_009955  Dshi_3640  type IV secretory pathway VirB3 family protein  31.03 
 
 		 92 aa  40.8  0.006  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.154816 
 
 
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