7 homologs were found in PanDaTox collection
for query gene Nham_0794 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_0794  hypothetical protein  100 
 
 
370 aa  766    Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00331983  n/a   
 
 
-
 
NC_007434  BURPS1710b_0965  hypothetical protein  28.81 
 
 
259 aa  122  8e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.157893  n/a   
 
 
-
 
NC_009076  BURPS1106A_0806  hypothetical protein  28.81 
 
 
265 aa  122  8e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5438  hypothetical protein  22.18 
 
 
293 aa  62  0.00000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.167952 
 
 
-
 
NC_003295  RSc2612  hypothetical protein  24.14 
 
 
282 aa  54.3  0.000004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6579  transcriptional regulator, SARP family  25.48 
 
 
457 aa  49.3  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2743  hypothetical protein  21.25 
 
 
278 aa  45.4  0.002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>