Gene Nham_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0794 
Symbol 
ID4032351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp878549 
End bp879661 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content55% 
IMG OID637969322 
Producthypothetical protein 
Protein accessionYP_576132 
Protein GI92116403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00331983 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTCT CCCGCCTTGC TGAATTTTCG GAGCCGTTAG CGGAACGTGG CTTCGTTGCG 
AAAATGCAGC ATAGCTGCCG TTATCGTGGC AATATCGCCG ATCAAGCTTC CACGGTCATA
GGGTCTTGCA AGTCAGCAAC GATGCAAGTC GTTCGTGGTT TCGAATTTCA CCGCTTCCGA
CGATCCTTGT GGATGTGTCG TCACAATCCA TTGCTGCAAA AGGCGGTACC CGCCAATCTG
GCAGTGGATA TGGCGACTCA CCTCATCAAA TCTTTGACTG TCGGTTTTCT ACGGCGCTGG
AAAGCCGGAT TAACGCGGGC CTTTGGTGTG GCCGGAGCGA TCTGGCTGGT CACTGAAATA
GTGACTCGTG TCTCCAGCTC GGCGAACGAT TGGCTGACCG CCAACGGAGA CGTTTACTTG
GGCGGCGTCC TGCTCGCAGG GGCTATGTGG TTTGTCGCCT ACTCCTACGA GCAGCGAAAG
GTGAAATTTC GAGTTCCGAC CACAAACAGC TACATCACAA TCAAGTTCGG TAACCTATTC
GAAGAAAGGT CAGACTGGCT AATTGGCGTT AACGAGTTCT TCGACGGCCG TCTTGGACAA
GTGATCGCAA AGACCTCCGT CCACGGGCAG TTCATCACTA ACGTATTCCA CGGCGACGAG
ACGCGATTTC GAGAAGCAGT GACGGCAGCT CTGGCTGGCG TGCCTTGCAC ATCCACTGCC
AGGATGAACT TGCCAGCGGA TTCCTACGAG ATTGGCACCA CGGCCGTCGT TGCTAACGGG
TCACAGAAGG CGTTCCTCGT GGCTATGTCC CGAACCGACC TTGTGACGCA TAAGGCTGGA
TCAACGGTGC CCATGCTTTT CGAAGCGATG AAGGGCGCGC TCGAATCAGT AAAGAACTAT
GGCAACGGCG AACCGCTGGC GTTGCCGCTA ATCGGCAACG GCCTTTCCAG CGTCAACTTA
GAGCCGCAAC ACCTGCTCAG GCTCATCACG CTGGCTTTGG TGGACTTTGG GCGAAAAGTC
AGCTTGCCCA AGCAAGTGAC CATCGTGGCA CCCGAGGGAT GCTTTGAACA GCTCGATATC
CGTGAAATCA AGCGAGATTG GATGAAGCGC TAG
 
Protein sequence
MIVSRLAEFS EPLAERGFVA KMQHSCRYRG NIADQASTVI GSCKSATMQV VRGFEFHRFR 
RSLWMCRHNP LLQKAVPANL AVDMATHLIK SLTVGFLRRW KAGLTRAFGV AGAIWLVTEI
VTRVSSSAND WLTANGDVYL GGVLLAGAMW FVAYSYEQRK VKFRVPTTNS YITIKFGNLF
EERSDWLIGV NEFFDGRLGQ VIAKTSVHGQ FITNVFHGDE TRFREAVTAA LAGVPCTSTA
RMNLPADSYE IGTTAVVANG SQKAFLVAMS RTDLVTHKAG STVPMLFEAM KGALESVKNY
GNGEPLALPL IGNGLSSVNL EPQHLLRLIT LALVDFGRKV SLPKQVTIVA PEGCFEQLDI
REIKRDWMKR