8 homologs were found in PanDaTox collection
for query gene Patl_2743 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_2743  hypothetical protein  100 
 
 
278 aa  563  1.0000000000000001e-159  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2612  hypothetical protein  65.11 
 
 
282 aa  381  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1282  hypothetical protein  64.03 
 
 
282 aa  376  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0965  hypothetical protein  24.62 
 
 
259 aa  68.2  0.0000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.157893  n/a   
 
 
-
 
NC_009076  BURPS1106A_0806  hypothetical protein  24.62 
 
 
265 aa  68.2  0.0000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5438  hypothetical protein  24.6 
 
 
293 aa  55.1  0.000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.167952 
 
 
-
 
NC_013131  Caci_6579  transcriptional regulator, SARP family  23.01 
 
 
457 aa  52.8  0.000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0794  hypothetical protein  21.59 
 
 
370 aa  45.1  0.001  Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00331983  n/a   
 
 
-
 
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