11 homologs were found in PanDaTox collection
for query gene Namu_1228 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_1228  protein of unknown function DUF324  100 
 
 
453 aa  894    Nakamurella multipartita DSM 44233  Bacteria  normal  0.726427  normal  0.459796 
 
 
-
 
NC_013159  Svir_20530  uncharacterized RAMP superfamily protein probably involved in DNA repair  30.32 
 
 
415 aa  120  3e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.587198 
 
 
-
 
NC_008599  CFF8240_1677  CRISPR-associated RAMP protein  23.85 
 
 
450 aa  55.8  0.000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.71005  n/a   
 
 
-
 
NC_009972  Haur_1918  hypothetical protein  22.96 
 
 
513 aa  53.5  0.000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2526  hypothetical protein  19.35 
 
 
504 aa  51.6  0.00003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0138  protein of unknown function DUF324  20.54 
 
 
474 aa  47.8  0.0004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0740  hypothetical protein  28.65 
 
 
257 aa  45.4  0.002  Methanospirillum hungatei JF-1  Archaea  normal  0.0101279  normal  0.181235 
 
 
-
 
NC_008698  Tpen_1288  CRISPR-associated Csm3 family protein  34.21 
 
 
307 aa  45.4  0.002  Thermofilum pendens Hrk 5  Archaea  normal  0.0685165  n/a   
 
 
-
 
NC_009440  Msed_1161  CRISPR-associated Csx7 family protein  24.86 
 
 
282 aa  44.7  0.003  Metallosphaera sedula DSM 5348  Archaea  normal  0.59336  hitchhiker  0.00757758 
 
 
-
 
NC_009012  Cthe_3212  hypothetical protein  21.56 
 
 
443 aa  44.7  0.004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2392  hypothetical protein  36.14 
 
 
338 aa  44.3  0.005  'Nostoc azollae' 0708  Bacteria  normal  0.556583  n/a   
 
 
-
 
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