| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1228 |
|---|
| Symbol | |
|---|
| ID | 8446824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1351156 |
|---|
| End bp | 1352517 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040363 |
|---|
| Product | protein of unknown function DUF324 |
|---|
| Protein accession | YP_003200622 |
|---|
| Protein GI | 258651466 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.726427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.459796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA TCACGCTGAT CCGGGTGGAC GGGACCGTGG ACGGCCCCTG GGCCATCGGA
TCGGGAGAGG CCGGGCAGGA GATCAATCAG GCCATGCTCG TGGACGAGCG GACCCAGGCG
CCTGTTCTGC CGTCCACCAC CCTGGCCGGT GCGCTGCGTG CCCACCTGGG AGAGCCGTCG
GCCAGCGATT GGCTCGGACC GGACTCAGAC GCCAGTGACG AGCAGGGGAA ACCGCTGTCC
GCCACGAGCC CGTCGCGGTT GTGGGCGCTG GGCGCGATCA CCACCGCCGG TCGGGACGAC
GCCCGATTGG AGCGACGGAC CGCGATCGAC CCGCAGCGAG GAGCGGCCGG CGGCCAGACC
CTGCGAACCG AGCACGTCGT CGACGTTGCC GACCCCGACC GGTCCTCGTT CCGCTGGGTG
CTGCAGCACG ACGGTGCCAT CGACCTTGCG CTGCTGGACC GCTTGGCTGA CTGGTCCTGC
GCGATCGGTG CGCGGCAGAC TCTCGGCCTG GGCCGGATGC GGGTGTCCCG GGTCGAGGCA
ATCACCCTGA ACCTGTCGGA GGCCCGCCAG CTGACCTGGT GGTTGACCCA ACGCGCCGAG
TGGCTCCGCG AGCCGGCCGG ACAACAGAAC GTGGAGTCTC CCGAGGACGG CCCGCACGAG
GTGCGGTGCG GAACGGCCAC GGAGAGCGGG TATCCAGTGT TCAGCTATCT ATGGCGCATC
GTCGATCCGC TGCACGTCGG CACACCGTCG AAGGGTGGCG ATGACGTCGC AACCGCGCCG
GATGGTGGTC GAATCGCTCA ACTTGCCCCG CTGCGCCGTT CGCGGACAGT GCCGGGCGCG
GCTGAGGTCC CGGGCAGCGC GTGGAAGGGC GTCTTCCGTC ACCGATGCGA ATTCATCTTG
CGCGCCTGCG GAGCCGGCGA GGACCAGATC GCCGCCGTTG TCGGAGTTCT GTTCGGCGCC
AGCGGCGAGG ACGGCCCGGG CCGGCGGCGA GGCCTGCTCG TGTTCGACCG GTCCACCGTG
GTGGCGCCGC CGGATGCGGT GACGTCACGG TCCCATGTTG CGATCGACCG GATCAGCGGG
GGTGCGGCGG ACGGCCTGCT CTACCGGATC GAATCGGTGG ACCGGGGTGA ACTGACCTTG
ACGGTGCGGT CGTTCGCGCA GCTGCCCGCG CCGGTGGGGA ACCTGCTCGA CCACGTGGTG
CGGGATCTGC ACGACGGGGT GGTGGGCATC GGCGGGTCGA CGACCCGTGG CTACGGCACC
ATCGCAGTGA CCGGCGATCC GCCGACGCCC GGACCGGTCG ATCTCCAGGG ATTGGGTACC
TTCGCGTCGA CCGTGCTCAA CTCGGCGAAG GCCCCAGCAT GA
|
|---|
| Protein sequence | MSTITLIRVD GTVDGPWAIG SGEAGQEINQ AMLVDERTQA PVLPSTTLAG ALRAHLGEPS
ASDWLGPDSD ASDEQGKPLS ATSPSRLWAL GAITTAGRDD ARLERRTAID PQRGAAGGQT
LRTEHVVDVA DPDRSSFRWV LQHDGAIDLA LLDRLADWSC AIGARQTLGL GRMRVSRVEA
ITLNLSEARQ LTWWLTQRAE WLREPAGQQN VESPEDGPHE VRCGTATESG YPVFSYLWRI
VDPLHVGTPS KGGDDVATAP DGGRIAQLAP LRRSRTVPGA AEVPGSAWKG VFRHRCEFIL
RACGAGEDQI AAVVGVLFGA SGEDGPGRRR GLLVFDRSTV VAPPDAVTSR SHVAIDRISG
GAADGLLYRI ESVDRGELTL TVRSFAQLPA PVGNLLDHVV RDLHDGVVGI GGSTTRGYGT
IAVTGDPPTP GPVDLQGLGT FASTVLNSAK APA
|
|---|
| |