11 homologs were found in PanDaTox collection
for query gene Msil_3888 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_3888  hypothetical protein  100 
 
 		 201 aa  401  1e-111  Methylocella silvestris BL2  Bacteria  n/a    normal  0.520868 
 
 
-
 
NC_011666  Msil_1296  hypothetical protein  80.28 
 
 		 103 aa  123  2e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011666  Msil_0919  hypothetical protein  49.19 
 
 		 244 aa  88.2  7e-17  Methylocella silvestris BL2  Bacteria  n/a    normal  0.338612 
 
 
-
 
NC_009720  Xaut_2116  hypothetical protein  42.03 
 
 		 225 aa  79  0.00000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.215594  normal  1 
 
 
-
 
NC_007925  RPC_2998  hypothetical protein  38.46 
 
 		 237 aa  78.2  0.00000000000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.0516943 
 
 
-
 
NC_009485  BBta_1287  putative general secretion pathway protein N, GspN  42.61 
 
 		 174 aa  75.5  0.0000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.371415  normal  1 
 
 
-
 
NC_009485  BBta_2621  hypothetical protein  37.21 
 
 		 225 aa  68.6  0.00000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0732  putative general secretion pathway protein N  37.78 
 
 		 228 aa  63.9  0.000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.556314  n/a   
 
 
-
 
NC_010002  Daci_1308  hypothetical protein  33.6 
 
 		 222 aa  48.1  0.0001  Delftia acidovorans SPH-1  Bacteria  normal  0.268206  normal  0.0527555 
 
 
-
 
NC_011071  Smal_0555  general secretion pathway protein N  34.86 
 
 		 263 aa  43.1  0.003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.319678  normal  0.126244 
 
 
-
 
NC_010577  XfasM23_0778  general secretion pathway protein N  30.77 
 
 		 255 aa  41.2  0.01  Xylella fastidiosa M23  Bacteria  normal  0.0420695  n/a   
 
 
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