Gene Daci_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1308 
Symbol 
ID5746863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1452309 
End bp1452977 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID641296387 
Producthypothetical protein 
Protein accessionYP_001562337 
Protein GI160896755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.268206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0527555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGC GCAATTTACT GGGCGCCGCC GAGGGCGTGA TGCTGCTGGC GCTGTGCGGC 
GCATTGGCAT GGTCATGGCT GACTCCGCAA TTGCACCTGC GCCAGACCGG CTGGACACCG
CCTGAGCCAC TGAAATCCAA CCTTCAGGCG CTGATGCCGC CCCCGACTGC AGCTCCCGGC
AGGGGGGAGG AGGAGCGCTG GCTGTTGACC ATGCAGGAGC GCCCCCTGTT TTCCATGAGC
CGCAAGCCGC CACCACCCGT CAAGAAGGTG GAGGCTCCGC CGCCCGAGCC GCCGGACGTG
TGGAAAGACG CCAGTGTGCT GGGCACTTTC CAGGGGCAGG CATCGGGCGC CATCGTGCGC
CTGGAAGGCA AGGACCAACG CCTGATGCTC AATCAGAGCC TGGGTGGCTG GAAGCTCGTT
GGTATCCAGG GGCGCTATAT CGAGCTTGAA CGCGCGGGCA CCAAGCGAAC CATAGACCTC
AAACGAGCCG CGCTTGACAA GGGGCCGAAT CTACCAGCAG GTGCCCGTGC GCCGACTCAG
CGGCCGTCCG AGCCGGTGGC CGCGCAAGCG GCTCCGGAGC CTGCCGCAGC CGATGCTCCG
GCCCCGCCGC AGCGCACATC CAGGGCTGTA TTCGGCGGAT CCAGGGCACA GCGTGCCGAC
AAACCATGA
 
Protein sequence
MMQRNLLGAA EGVMLLALCG ALAWSWLTPQ LHLRQTGWTP PEPLKSNLQA LMPPPTAAPG 
RGEEERWLLT MQERPLFSMS RKPPPPVKKV EAPPPEPPDV WKDASVLGTF QGQASGAIVR
LEGKDQRLML NQSLGGWKLV GIQGRYIELE RAGTKRTIDL KRAALDKGPN LPAGARAPTQ
RPSEPVAAQA APEPAAADAP APPQRTSRAV FGGSRAQRAD KP