11 homologs were found in PanDaTox collection
for query gene BBta_2621 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2621  hypothetical protein  100 
 
 
225 aa  444  1.0000000000000001e-124  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1287  putative general secretion pathway protein N, GspN  46.43 
 
 
174 aa  90.1  2e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.371415  normal 
 
 
-
 
NC_007964  Nham_0732  putative general secretion pathway protein N  52.14 
 
 
228 aa  84.7  0.000000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.556314  n/a   
 
 
-
 
NC_011666  Msil_3888  hypothetical protein  41.98 
 
 
201 aa  75.5  0.0000000000006  Methylocella silvestris BL2  Bacteria  n/a    normal  0.520868 
 
 
-
 
NC_007925  RPC_2998  hypothetical protein  41.53 
 
 
237 aa  73.9  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0516943 
 
 
-
 
NC_009720  Xaut_2116  hypothetical protein  42.02 
 
 
225 aa  73.9  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.215594  normal 
 
 
-
 
NC_011666  Msil_0919  hypothetical protein  42.45 
 
 
244 aa  52.4  0.000006  Methylocella silvestris BL2  Bacteria  n/a    normal  0.338612 
 
 
-
 
NC_011666  Msil_1296  hypothetical protein  29.03 
 
 
103 aa  49.3  0.00005  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_0679  hypothetical protein  33.96 
 
 
238 aa  45.8  0.0005  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.000567702  decreased coverage  0.000108623 
 
 
-
 
NC_007484  Noc_0760  hypothetical protein  28.57 
 
 
198 aa  44.3  0.001  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00283105  n/a   
 
 
-
 
NC_010581  Bind_1592  hypothetical protein  34.69 
 
 
147 aa  44.7  0.001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.566182  normal  0.398934 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>