16 homologs were found in PanDaTox collection
for query gene Mnod_6888 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_6888  hypothetical protein  100 
 
 
134 aa  268  2.9999999999999997e-71  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5819  hypothetical protein  71.43 
 
 
135 aa  153  7e-37  Methylobacterium sp. 4-46  Bacteria  normal  0.101371  hitchhiker  0.00770286 
 
 
-
 
NC_007959  Nham_4182  hypothetical protein  39.66 
 
 
130 aa  85.1  3e-16  Nitrobacter hamburgensis X14  Bacteria  normal  0.205872  n/a   
 
 
-
 
NC_010725  Mpop_0023  hypothetical protein  41.75 
 
 
173 aa  80.5  0.000000000000007  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6228  hypothetical protein  39.81 
 
 
189 aa  73.9  0.0000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.223806  normal  0.0379328 
 
 
-
 
NC_011757  Mchl_0165  hypothetical protein  37.89 
 
 
173 aa  65.5  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.134361  normal  0.0134933 
 
 
-
 
NC_010172  Mext_0221  hypothetical protein  37.89 
 
 
173 aa  64.7  0.0000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.433296  normal 
 
 
-
 
NC_013525  Tter_1590  hypothetical protein  31.86 
 
 
162 aa  59.7  0.00000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_1524  hypothetical protein  30.09 
 
 
134 aa  45.8  0.0002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0830  hypothetical protein  40.32 
 
 
130 aa  44.7  0.0005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.809001  normal  0.143876 
 
 
-
 
NC_010505  Mrad2831_1039  hypothetical protein  47.06 
 
 
162 aa  43.1  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.081584 
 
 
-
 
NC_010571  Oter_3929  hypothetical protein  30 
 
 
105 aa  42.7  0.002  Opitutus terrae PB90-1  Bacteria  normal  0.224817  normal 
 
 
-
 
NC_007484  Noc_1243  hypothetical protein  29.59 
 
 
139 aa  41.6  0.004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0846  hypothetical protein  45.83 
 
 
147 aa  41.2  0.005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5950  hypothetical protein  36.36 
 
 
124 aa  40  0.01  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3987  hypothetical protein  31.48 
 
 
106 aa  40  0.01  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.298867  n/a   
 
 
-
 
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