| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3929 |
|---|
| Symbol | |
|---|
| ID | 6206534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5101190 |
|---|
| End bp | 5101507 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820803 |
|---|
| Protein GI | 182415737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.224817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC ATCCTGCTTC CTCCGCGCCC ACGTCGCCGC GCGCGCCGCT GATCAGCGTG
CTCGGGGTCC TGGTGTTGTT CGCGCTGTTC GCCGTGGTGG TCTACTACGT CTACGTGCCG
CGCCAGACCG GCGCCTTTCC CGACGATGGC ATTCGCACCG AGAAACAGCG TCGCGAGGCG
CTCGCCGAGC TGCACGCGAA GGAAGCGAAG CAGCTCAGCA GCTACGGCTG GGTCGACCAG
AAAGCGGGCG TGGTGCAGCT GCCGCTCGAT CGCGCGATGG AGCTGACGCT GCAGAAATAT
CAGAAGCCTC CGCAATGA
|
|---|
| Protein sequence | MSEHPASSAP TSPRAPLISV LGVLVLFALF AVVVYYVYVP RQTGAFPDDG IRTEKQRREA
LAELHAKEAK QLSSYGWVDQ KAGVVQLPLD RAMELTLQKY QKPPQ
|
|---|
| |