13 homologs were found in PanDaTox collection
for query gene Nham_4182 on replicon NC_007959
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007959  Nham_4182  hypothetical protein  100 
 
 
130 aa  261  2e-69  Nitrobacter hamburgensis X14  Bacteria  normal  0.205872  n/a   
 
 
-
 
NC_010510  Mrad2831_6228  hypothetical protein  43.27 
 
 
189 aa  88.2  4e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.223806  normal  0.0379328 
 
 
-
 
NC_010725  Mpop_0023  hypothetical protein  41.35 
 
 
173 aa  88.2  4e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6888  hypothetical protein  39.66 
 
 
134 aa  85.1  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0221  hypothetical protein  38.95 
 
 
173 aa  77.8  0.00000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.433296  normal 
 
 
-
 
NC_011757  Mchl_0165  hypothetical protein  38.95 
 
 
173 aa  77.8  0.00000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.134361  normal  0.0134933 
 
 
-
 
NC_010511  M446_5819  hypothetical protein  38.74 
 
 
135 aa  69.7  0.00000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.101371  hitchhiker  0.00770286 
 
 
-
 
NC_013525  Tter_1590  hypothetical protein  42.11 
 
 
162 aa  57.8  0.00000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011365  Gdia_0830  hypothetical protein  41.51 
 
 
130 aa  48.9  0.00002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.809001  normal  0.143876 
 
 
-
 
NC_014148  Plim_3987  hypothetical protein  60 
 
 
106 aa  48.9  0.00003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.298867  n/a   
 
 
-
 
NC_007484  Noc_1243  hypothetical protein  36.92 
 
 
139 aa  46.2  0.0002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0846  hypothetical protein  56.41 
 
 
147 aa  44.7  0.0004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1524  hypothetical protein  38.46 
 
 
134 aa  42  0.003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
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