11 homologs were found in PanDaTox collection
for query gene Mesil_0525 on replicon NC_014212
Organism: Meiothermus silvanus DSM 9946



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014212  Mesil_0525  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  100 
 
 		 243 aa  479  1e-134  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.397835 
 
 
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NC_013946  Mrub_0541  putative RNA polymerase sigma 28 subunit, FliA/WhiG subfamily  84.62 
 
 		 239 aa  382  1e-105  Meiothermus ruber DSM 1279  Bacteria  normal  0.304239  normal  0.180658 
 
 
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NC_014214  Mesil_3659  sigma-70 region 3 domain protein  80.66 
 
 		 236 aa  377  1e-104  Meiothermus silvanus DSM 9946  Bacteria  normal  0.795056  n/a   
 
 
-
 
NC_014213  Mesil_3248  hypothetical protein  80.43 
 
 		 76 aa  68.2  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_0528  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  30.36 
 
 		 285 aa  47  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.795075  normal  1 
 
 
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NC_014210  Ndas_1198  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  29.73 
 
 		 313 aa  47.4  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.179495  normal  0.392398 
 
 
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NC_011830  Dhaf_3442  RNA polymerase, sigma 28 subunit, SigF  29.87 
 
 		 261 aa  44.3  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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NC_014210  Ndas_1770  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  26.26 
 
 		 287 aa  44.3  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.283313 
 
 
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NC_014210  Ndas_2402  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  29.05 
 
 		 285 aa  44.3  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.138133 
 
 
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NC_013124  Afer_1208  RNA polymerase, sigma 70 subunit, RpoD subfamily  28.89 
 
 		 302 aa  43.9  0.003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.10341  n/a   
 
 
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NC_013385  Adeg_0863  RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily  27.54 
 
 		 245 aa  42.4  0.007  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
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