| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3442 |
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| Symbol | |
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| ID | 7260460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 3675582 |
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| End bp | 3676367 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643563365 |
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| Product | RNA polymerase, sigma 28 subunit, SigF |
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| Protein accession | YP_002459896 |
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| Protein GI | 219669461 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATTC AAAGACTAAC GGAAATGAAC CTTCCCCGCT TCCCTCTTTT ATCGGACGAA
GAGATGATGG ATCTGCTCCA TCGCGCCCAA AACGGTGATG CTGAAGCCAG AGAGCGGCTG
ATCAACTGCA ATCTTAAACT GATCTTCAAT CTTGTCCAAC GCTTTTCTCA CCGCGGGTAT
GAGCTGGAGG ATCTCTTTCA AATCGGCACC ATCGGTCTGA TCAAGGCTAT CGACAAATTT
GACTTTACTT ATGGCGTCAA GTTCTCCACC TATGCAGTCC CCATGATTAT CGGGGAGATC
CGCCGTTTCC TGCGGGACGA TCATCCCGTT AAGGTCCCCC GCTCCTACAA AGAGCTGGTT
TATAAAGTCA ATAAGGCCCG GGAAAGCCTG TCGGCAACCT TGGGCCGGGA CCCTACCATC
GGCGAAATCG CAGAAAGTAT CGGAGTCGAT CGAGAAGACA TTGTATCTGC CTTAGAAGCG
GTCCAAAGTC CTACTTCCAT TCATGATACC CTCTATCAAG ATGACTCCGA TCCCATCTAT
ATTTTGGATC AACTTCCTAT GGAGAAGGAT TTGGAGGCCG GTTGGTTTGA AAAGATTGCC
CTGAAAGAGG TTCTGGACAA ACTCCCTGAA CGGGAAAAAC GAGTTTTGAT GATGCGTTTT
TATGAAGATA AGACCCAAAG TGAGATCGCA GCCCTCCTTA ACCTTTCCCA AGTCCAAATC
TCAAGGATCG AGCGGGCTGC TCTGCACCGT ATTCGCCAGT ATCTCCATGA ACCCGAGCAT
GATTAA
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| Protein sequence | MMIQRLTEMN LPRFPLLSDE EMMDLLHRAQ NGDAEARERL INCNLKLIFN LVQRFSHRGY
ELEDLFQIGT IGLIKAIDKF DFTYGVKFST YAVPMIIGEI RRFLRDDHPV KVPRSYKELV
YKVNKARESL SATLGRDPTI GEIAESIGVD REDIVSALEA VQSPTSIHDT LYQDDSDPIY
ILDQLPMEKD LEAGWFEKIA LKEVLDKLPE REKRVLMMRF YEDKTQSEIA ALLNLSQVQI
SRIERAALHR IRQYLHEPEH D
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