6 homologs were found in PanDaTox collection
for query gene Mrub_0541 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013946  Mrub_0541  putative RNA polymerase sigma 28 subunit, FliA/WhiG subfamily  100 
 
 		 239 aa  473  1e-132  Meiothermus ruber DSM 1279  Bacteria  normal  0.304239  normal  0.180658 
 
 
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NC_014214  Mesil_3659  sigma-70 region 3 domain protein  83.54 
 
 		 236 aa  387  1e-107  Meiothermus silvanus DSM 9946  Bacteria  normal  0.795056  n/a   
 
 
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NC_014212  Mesil_0525  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  85.83 
 
 		 243 aa  377  1e-103  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.397835 
 
 
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NC_014213  Mesil_3248  hypothetical protein  69.39 
 
 		 76 aa  58.9  0.00000007  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
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NC_014210  Ndas_1770  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  28.57 
 
 		 287 aa  44.3  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.283313 
 
 
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NC_008817  P9515_18881  type II alternative sigma-70 family RNA polymerase sigma factor  31.03 
 
 		 339 aa  42.4  0.006  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.231535  n/a   
 
 
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