8 homologs were found in PanDaTox collection
for query gene Mchl_1960 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_1960    100 
 
 
351 bp  696    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.495486  normal 
 
 
-
 
NC_011757  Mchl_0093  Transposase and inactivated derivatives-like protein  80.6 
 
 
944 bp  149  6e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4162    80.15 
 
 
567 bp  111  1e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3697  transposase and inactivated derivatives-like protein  83.97 
 
 
567 bp  93.7  3e-17  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6904  transposase and inactivated derivatives-like protein  81.1 
 
 
567 bp  79.8  0.0000000000005  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4238    81.25 
 
 
177 bp  56  0.000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.105972 
 
 
-
 
NC_010580  Bind_3830  transposase  89.36 
 
 
944 bp  54  0.00003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3006  transposase  89.36 
 
 
944 bp  54  0.00003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0864202 
 
 
-
 
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