16 homologs were found in PanDaTox collection
for query gene Mchl_1062 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_1062  cytochrome c biogenesis protein transmembrane region  100 
 
 		 102 aa  194  5.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.989417  normal  0.65288 
 
 
-
 
NC_010505  Mrad2831_2559  cytochrome c biogenesis protein transmembrane region  54.37 
 
 		 239 aa  91.3  4e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.608237  normal  1 
 
 
-
 
NC_009720  Xaut_2721  cytochrome c biogenesis protein transmembrane region  51 
 
 		 245 aa  84  7e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0697099  normal  1 
 
 
-
 
NC_010172  Mext_0187  cytochrome c biogenesis protein transmembrane region  52.88 
 
 		 239 aa  77.4  0.00000000000007  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.698131 
 
 
-
 
NC_009485  BBta_3390  putative cytochrome c-type biogenesis protein  53.54 
 
 		 239 aa  77  0.00000000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.927366  normal  1 
 
 
-
 
NC_010725  Mpop_0211  cytochrome c biogenesis protein transmembrane region  55.45 
 
 		 239 aa  75.1  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5438  cytochrome c biogenesis protein transmembrane region  46.15 
 
 		 239 aa  73.2  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.249555  hitchhiker  0.00388506 
 
 
-
 
NC_011666  Msil_0947  cytochrome c biogenesis protein transmembrane region  53 
 
 		 239 aa  72  0.000000000003  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.000313224 
 
 
-
 
NC_011757  Mchl_0130  cytochrome c biogenesis protein transmembrane region  51.92 
 
 		 239 aa  64.7  0.0000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.128074 
 
 
-
 
NC_010505  Mrad2831_5394  cytochrome c biogenesis protein transmembrane region  47.92 
 
 		 239 aa  59.7  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4594  cytochrome c biogenesis protein, transmembrane region  45.83 
 
 		 250 aa  48.5  0.00003  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010678  Rpic_4600  cytochrome c biogenesis protein transmembrane region  47.89 
 
 		 242 aa  47  0.00008  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3524  cytochrome c biogenesis protein transmembrane region  47.89 
 
 		 242 aa  47  0.00008  Ralstonia pickettii 12D  Bacteria  normal  0.239201  normal  1 
 
 
-
 
NC_007355  Mbar_A0632  cytochrome c-type biogenesis protein  37.68 
 
 		 216 aa  42.4  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.159383  normal  1 
 
 
-
 
NC_007298  Daro_3156  cytochrome c biogenesis protein, transmembrane region  35.06 
 
 		 242 aa  40.8  0.006  Dechloromonas aromatica RCB  Bacteria  normal  0.132612  normal  1 
 
 
-
 
NC_008781  Pnap_2512  cytochrome c biogenesis protein, transmembrane region  50 
 
 		 244 aa  40.4  0.009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.308751  normal  0.32204 
 
 
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