| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2512 |
|---|
| Symbol | |
|---|
| ID | 4686135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2648780 |
|---|
| End bp | 2649514 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639835520 |
|---|
| Product | cytochrome c biogenesis protein, transmembrane region |
|---|
| Protein accession | YP_982737 |
|---|
| Protein GI | 121605408 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.308751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.32204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTT CATTGACTGT TCCACAAGTT GGGTTGAGCC TGTTTGCCGG TAGCCTGACC
ACTTTGTCGC CGTGCGTTTT TCCACTGTTG CCGCTGGTAT TGGGAGGCGC TTTGCAGGGT
AACCGCTTCG CACCCGTCGC CATGGGTGTG GGCATGACGA CCTCATTTGC GTTGATCGGA
ATGGTCCTCG GTGCGCTAGG CCCGGCTCTT GGTATTGACG GCGACACCGT GCGCGCGGGT
GGTGCTGCAA TGCTGATTGC CTTCGCTATT GTGATGCTGG TTCCGGCCCT GGGTGAACGG
TTCACGCAAT GGATGTTACC GATTGCCAGT TCGGCGAATG CTGCATCGGC CAAACTCGAC
AGTGGCTCCT TGGTGGGCGC GCTGATGCTT GGAAGTGTTC TCGGCCTGGT ATGGAGCCCC
TGTTCTGGAC CATTGCTGGG ATCGGCCCTG ACGCTGGTAG CCAGTGAAGG TGGTGTGGCG
CGTGGTGGTT TGGTGCTTGG CATTTTTGGC CTGGGTGCAG CCATCCCATT GGTGGCGGTG
GCTTACGCAT CGCGCAGTGG TTTTATGCGC ATGCGAGACT GGGTTCTAGC ACGCATCGAA
AGCGTGCGTT ATGTTTTTGC GTTGTTACTC GGTGCCATGG GGGTCGCGAT TTTGACTGGC
GGCGATAAAT GGCTTGAAGC GCAGGTTCTG AAGTGGTTGC CGGATGCCTG GGTTAATTTC
ACTGTAGGAA TATAG
|
|---|
| Protein sequence | MTLSLTVPQV GLSLFAGSLT TLSPCVFPLL PLVLGGALQG NRFAPVAMGV GMTTSFALIG
MVLGALGPAL GIDGDTVRAG GAAMLIAFAI VMLVPALGER FTQWMLPIAS SANAASAKLD
SGSLVGALML GSVLGLVWSP CSGPLLGSAL TLVASEGGVA RGGLVLGIFG LGAAIPLVAV
AYASRSGFMR MRDWVLARIE SVRYVFALLL GAMGVAILTG GDKWLEAQVL KWLPDAWVNF
TVGI
|
|---|
| |