7 homologs were found in PanDaTox collection
for query gene Mbar_AR0030 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007355  Mbar_AR0030  tRNA-Tyr  100 
 
 
116 bp  230  6e-59  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_R0031  tRNA-Tyr  100 
 
 
109 bp  89.7  1e-16  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00928668  n/a   
 
 
-
 
NC_009051  Memar_R0033  tRNA-OTHER  94.87 
 
 
107 bp  56  0.000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_R0031  tRNA-OTHER  94.87 
 
 
106 bp  56  0.000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.368519 
 
 
-
 
NC_011832  Mpal_R0054  tRNA-Tyr  94.87 
 
 
105 bp  56  0.000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_R0053  tRNA-Tyr  94.74 
 
 
106 bp  54  0.000008  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_R0051  tRNA-OTHER  94.59 
 
 
111 bp  50.1  0.0001  Methanocorpusculum labreanum Z  Archaea  hitchhiker  0.0000000231354  decreased coverage  0.00000000261131 
 
 
-
 
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