9 homologs were found in PanDaTox collection
for query gene Mbar_AR0025 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007355  Mbar_AR0025  tRNA-Arg  100 
 
 
72 bp  143  6e-33  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_R0008  tRNA-Arg  88.89 
 
 
72 bp  79.8  0.00000000000008  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_R0045  tRNA-Arg  89.23 
 
 
72 bp  73.8  0.000000000005  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_R0027  tRNA-Arg  88.33 
 
 
72 bp  63.9  0.000000005  Methanoculleus marisnigri JR1  Archaea  normal  0.658502  n/a   
 
 
-
 
NC_007796  Mhun_R0012  tRNA-Arg  86.57 
 
 
72 bp  61.9  0.00000002  Methanospirillum hungatei JF-1  Archaea  normal  0.683536  normal  0.458428 
 
 
-
 
NC_008942  Mlab_R0027  tRNA-OTHER  86.67 
 
 
72 bp  56  0.000001  Methanocorpusculum labreanum Z  Archaea  hitchhiker  0.00000206606  hitchhiker  0.0000802829 
 
 
-
 
NC_009712  Mboo_R0019  tRNA-Arg  85 
 
 
72 bp  48.1  0.0003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.186619  normal  0.0165444 
 
 
-
 
NC_011832  Mpal_R0012  tRNA-Arg  85 
 
 
72 bp  48.1  0.0003  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_R0015  tRNA-OTHER  89.74 
 
 
86 bp  46.1  0.001  Methanosaeta thermophila PT  Archaea  hitchhiker  0.00401189  n/a   
 
 
-
 
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