13 homologs were found in PanDaTox collection
for query gene Mbar_A2509 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007355  Mbar_A2509  DNA-directed RNA polymerase subunit P  100 
 
 		 45 aa  92.4  2e-18  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00614526  normal  0.337835 
 
 
-
 
NC_008553  Mthe_1359  DNA-directed RNA polymerase subunit P  77.27 
 
 		 45 aa  79.3  0.00000000000001  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0202  DNA-directed RNA polymerase subunit P  78.26 
 
 		 46 aa  73.9  0.0000000000006  Methanococcoides burtonii DSM 6242  Archaea  normal  0.51611  n/a   
 
 
-
 
NC_013158  Huta_2673  DNA-directed RNA polymerase subunit P  62.22 
 
 		 44 aa  62.4  0.000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_013743  Htur_1482  RNA polymerase Rbp10  55.56 
 
 		 44 aa  60.1  0.000000009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009712  Mboo_1819  DNA-directed RNA polymerase subunit P  69.05 
 
 		 44 aa  59.7  0.00000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_0565  DNA-directed RNA polymerase subunit P  57.78 
 
 		 44 aa  60.1  0.00000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.88465  normal  1 
 
 
-
 
NC_013922  Nmag_2452  RNA polymerase Rbp10  55.56 
 
 		 44 aa  59.7  0.00000001  Natrialba magadii ATCC 43099  Archaea  normal  0.474436  n/a   
 
 
-
 
NC_009051  Memar_1675  DNA-directed RNA polymerase subunit P  69.77 
 
 		 43 aa  59.3  0.00000002  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_2285  DNA-directed RNA polymerase subunit P  65.12 
 
 		 44 aa  58.5  0.00000003  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_0013  RNA polymerase Rbp10  55.56 
 
 		 44 aa  58.5  0.00000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.502015  normal  0.833667 
 
 
-
 
NC_011832  Mpal_2523  DNA-directed RNA polymerase subunit P  61.9 
 
 		 44 aa  54.3  0.0000006  Methanosphaerula palustris E1-9c  Archaea  normal  0.330043  normal  1 
 
 
-
 
NC_008942  Mlab_1857  DNA-directed RNA polymerase subunit P  61.36 
 
 		 43 aa  52.8  0.000002  Methanocorpusculum labreanum Z  Archaea  normal  0.201091  hitchhiker  0.00457594 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>