Gene Hlac_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0565 
Symbol 
ID7401700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp586219 
End bp586353 
Gene Length135 bp 
Protein Length44 aa 
Translation table11 
GC content63% 
IMG OID643707630 
ProductDNA-directed RNA polymerase subunit P 
Protein accessionYP_002565237 
Protein GI222479000 
COG category[K] Transcription 
COG ID[COG1996] DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.88465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA AGTGCTCCCG CTGTAAGCGC GACGTTACCC TCGACGAGTA CGGCGGCGTG 
CGCTGTCCGT ACTGCGGTCA CCGCGTCCTC CTGAAGGAGC GCGGCGGCGA CGTGAAGGAA
GTGAACGTCG AGTAA
 
Protein sequence
MSYKCSRCKR DVTLDEYGGV RCPYCGHRVL LKERGGDVKE VNVE