8 homologs were found in PanDaTox collection
for query gene Lcho_3418 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_3418  general secretion pathway protein C  100 
 
 		 195 aa  366  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000246918 
 
 
-
 
NC_008825  Mpe_A3127  general secretion pathway protein C  40.35 
 
 		 186 aa  73.2  0.000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0752343 
 
 
-
 
NC_007948  Bpro_1320  hypothetical protein  35.82 
 
 		 147 aa  60.5  0.00000002  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_1082  hypothetical protein  36.3 
 
 		 211 aa  51.2  0.00001  Variovorax paradoxus S110  Bacteria  normal  0.537325  n/a   
 
 
-
 
NC_007908  Rfer_0533  hypothetical protein  36.9 
 
 		 167 aa  45.4  0.0005  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0765  hypothetical protein  35.38 
 
 		 148 aa  44.7  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.399241  normal  0.0717965 
 
 
-
 
NC_008752  Aave_0926  hypothetical protein  36.96 
 
 		 158 aa  43.1  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0152413  normal  0.879508 
 
 
-
 
NC_010002  Daci_5688  hypothetical protein  39.44 
 
 		 157 aa  43.5  0.002  Delftia acidovorans SPH-1  Bacteria  normal  0.0188515  normal  0.126063 
 
 
-
 
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